STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ermp1Peptidase_M28 domain-containing protein. (319 aa)    
Predicted Functional Partners:
epor
Erythropoietin receptor.
    
 0.768
gak
Cyclin G associated kinase.
    
  0.683
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
     
 0.600
LOC103371043
Uncharacterized protein.
     
 0.558
psmd3
Proteasome 26S subunit, non-ATPase 3.
   
 
 0.545
mpl
MPL proto-oncogene, thrombopoietin receptor.
     
 0.545
il4r
Uncharacterized protein.
     
 0.542
LOC103353035
NAD kinase b.
    
 0.542
nadk
NAD kinase a.
    
 0.542
galt
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
  
 
  0.541
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.