STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363383Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
LOC103354885
Uncharacterized protein.
   
 
0.859
cd247
Uncharacterized protein.
     
 0.770
LOC103369844
Ig_4 domain-containing protein.
   
 
 0.718
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.708
LOC103357838
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.708
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.708
cd3g
Uncharacterized protein.
   
 
 0.700
LOC103369871
Ig-like domain-containing protein.
     
 0.700
ENSSPAP00000000274
Ig-like domain-containing protein.
     
 0.685
LOC103360946
Uncharacterized protein.
  
 0.685
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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