STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366176Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1935 aa)    
Predicted Functional Partners:
LOC103363874
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.842
LOC103376604
Uncharacterized protein.
   
 0.752
LOC103368462
Zgc:153867.
   
 0.752
myl3
Myosin, light chain 13.
   
 0.748
ENSSPAP00000027259
Uncharacterized protein.
   
 0.747
LOC103358995
Myosin, light chain 2a, regulatory, cardiac, slow.
   
 0.739
LOC103366907
Uncharacterized protein.
   
 0.739
LOC103374050
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 0.730
ENSSPAP00000007444
Uncharacterized protein.
   
 0.730
mylpf
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.730
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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