STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374069Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.887
LOC103368474
Sterol carrier protein 2b.
  
 
 0.887
acot8
Acyl-CoA thioesterase 8.
    
 0.876
acot7
Acyl-CoA thioesterase 7.
  
 
 0.861
ENSSPAP00000004222
Uncharacterized protein.
     
 0.843
LOC103375650
Uncharacterized protein.
  
  
 
0.833
LOC103359352
Uncharacterized protein.
  
 
 
0.830
LOC103376601
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
    
  0.829
gad2
Glutamate decarboxylase 2.
  
 
  0.829
LOC103370532
Uncharacterized protein.
  
  
 
0.825
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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