STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl43Mitochondrial ribosomal protein L43. (151 aa)    
Predicted Functional Partners:
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.997
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.997
ENSSPAP00000014515
Mitochondrial ribosomal protein S2.
   
 
 0.997
mrpl34
Mitochondrial ribosomal protein L34.
   
 
 0.996
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.996
mrpl16
Mitochondrial ribosomal protein L16.
   
  0.996
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.995
mrpl36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.995
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.995
ENSSPAP00000028159
Mitochondrial ribosomal protein L41.
   
 
 0.995
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.