STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tomm34Translocase of outer mitochondrial membrane 34. (324 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.951
ENSSPAP00000019281
Uncharacterized protein.
 
     
0.896
ak9
Adenylate kinase 9.
   
 0.889
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.789
bbs9
Bardet-Biedl syndrome 9.
    
 0.779
dnajc7
DnaJ (Hsp40) homolog, subfamily C, member 7.
   
0.776
LOC103369715
Uncharacterized protein.
   
0.776
ENSSPAP00000016296
DUF4062 domain-containing protein.
   
 0.772
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
    
 0.764
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
 0.763
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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