STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mad2l2Mitotic arrest deficient 2 like 2. (210 aa)    
Predicted Functional Partners:
rev1
REV1 DNA directed polymerase.
   
 0.998
ENSSPAP00000010489
Uncharacterized protein.
    
 0.985
ENSSPAP00000010503
DNA_pol_B domain-containing protein.
    
 0.985
polh
Polymerase (DNA directed), eta.
   
 0.980
poli
Polymerase (DNA directed) iota.
   
 0.978
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 
 0.977
polk
Polymerase (DNA directed) kappa.
   
 0.977
LOC103372802
Uncharacterized protein.
    
 
 0.976
shld2
Si:ch211-134m17.9.
    
 
 0.974
pold1
DNA polymerase.
    
 0.972
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.