ENSSPAP00000007934 protein (Stegastes partitus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSPAP00000007934

HintC domain-containing protein. (246 aa)

Predicted Functional Partners:

ptch2

0.985

ptch1

0.982

hhip

0.974

disp1

0.954

boc

0.945

cdon

0.945

disp2

0.898

ENSSPAP00000027952

0.896

ENSSPAP00000027058

0.888

ENSSPAP00000029941

0.888

Your Current Organism:

Stegastes partitus

NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSPAP00000007934	ENSSPAP00000027058	ENSSPAP00000007934	ENSSPAP00000027058	HintC domain-containing protein.	Uncharacterized protein.	0.888
ENSSPAP00000007934	ENSSPAP00000027952	ENSSPAP00000007934	ENSSPAP00000027952	HintC domain-containing protein.	Growth arrest-specific 1a.	0.896
ENSSPAP00000007934	ENSSPAP00000029941	ENSSPAP00000007934	ENSSPAP00000029941	HintC domain-containing protein.	Growth arrest-specific 1b.	0.888
ENSSPAP00000007934	boc	ENSSPAP00000007934	ENSSPAP00000025204	HintC domain-containing protein.	BOC cell adhesion associated, oncogene regulated.	0.945
ENSSPAP00000007934	cdon	ENSSPAP00000007934	ENSSPAP00000031051	HintC domain-containing protein.	Cell adhesion associated, oncogene regulated.	0.945
ENSSPAP00000007934	disp1	ENSSPAP00000007934	ENSSPAP00000007089	HintC domain-containing protein.	Dispatched homolog 1 (Drosophila).	0.954
ENSSPAP00000007934	disp2	ENSSPAP00000007934	ENSSPAP00000004639	HintC domain-containing protein.	Dispatched homolog 2 (Drosophila).	0.898
ENSSPAP00000007934	hhip	ENSSPAP00000007934	ENSSPAP00000004036	HintC domain-containing protein.	Hedgehog interacting protein.	0.974
ENSSPAP00000007934	ptch1	ENSSPAP00000007934	ENSSPAP00000005973	HintC domain-containing protein.	Patched 1.	0.982
ENSSPAP00000007934	ptch2	ENSSPAP00000007934	ENSSPAP00000019617	HintC domain-containing protein.	Patched 2.	0.985
ENSSPAP00000027058	ENSSPAP00000007934	ENSSPAP00000027058	ENSSPAP00000007934	Uncharacterized protein.	HintC domain-containing protein.	0.888
ENSSPAP00000027058	ENSSPAP00000027952	ENSSPAP00000027058	ENSSPAP00000027952	Uncharacterized protein.	Growth arrest-specific 1a.	0.904
ENSSPAP00000027058	ENSSPAP00000029941	ENSSPAP00000027058	ENSSPAP00000029941	Uncharacterized protein.	Growth arrest-specific 1b.	0.903
ENSSPAP00000027058	boc	ENSSPAP00000027058	ENSSPAP00000025204	Uncharacterized protein.	BOC cell adhesion associated, oncogene regulated.	0.925
ENSSPAP00000027058	cdon	ENSSPAP00000027058	ENSSPAP00000031051	Uncharacterized protein.	Cell adhesion associated, oncogene regulated.	0.925
ENSSPAP00000027058	ptch1	ENSSPAP00000027058	ENSSPAP00000005973	Uncharacterized protein.	Patched 1.	0.925
ENSSPAP00000027058	ptch2	ENSSPAP00000027058	ENSSPAP00000019617	Uncharacterized protein.	Patched 2.	0.925
ENSSPAP00000027952	ENSSPAP00000007934	ENSSPAP00000027952	ENSSPAP00000007934	Growth arrest-specific 1a.	HintC domain-containing protein.	0.896
ENSSPAP00000027952	ENSSPAP00000027058	ENSSPAP00000027952	ENSSPAP00000027058	Growth arrest-specific 1a.	Uncharacterized protein.	0.904
ENSSPAP00000027952	ENSSPAP00000029941	ENSSPAP00000027952	ENSSPAP00000029941	Growth arrest-specific 1a.	Growth arrest-specific 1b.	0.901