STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103366192Fork-head domain-containing protein. (342 aa)    
Predicted Functional Partners:
LOC103353152
Fork-head domain-containing protein.
  
  
 
0.827
suox
Sulfite oxidase.
     
 0.793
sirt1
Deacetylase sirtuin-type domain-containing protein.
    
 0.730
mecp2
Methyl CpG binding protein 2.
    
 0.681
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.659
snrpd2
Small nuclear ribonucleoprotein Sm D2.
 
   
 0.648
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.645
sirt2
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase.
    
 0.636
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
   
 0.634
LOC103374507
Mothers against decapentaplegic homolog.
    
 0.615
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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