STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103372903Calpain 14; Belongs to the peptidase C2 family. (650 aa)    
Predicted Functional Partners:
ENSSPAP00000024918
Uncharacterized protein.
   
 0.846
LOC103371250
Uncharacterized protein.
    
  0.798
bax
BCL2 associated X, apoptosis regulator a.
    
  0.798
LOC103357552
Zgc:153993.
   
  0.798
LOC103368853
Calpain, small subunit 1 b.
   
0.716
LOC103372139
Uncharacterized protein.
   
0.716
LOC103368939
Zgc:55262; Belongs to the peptidase C2 family.
  
  
 
0.641
LOC103371221
Intersectin 2b.
   
 
  0.618
ENSSPAP00000031427
Uncharacterized protein.
   
 
  0.618
ENSSPAP00000031428
Uncharacterized protein.
   
 
  0.618
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.