STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
me3Malic enzyme. (616 aa)    
Predicted Functional Partners:
fh
Fumarate hydratase.
  
 
 0.969
LOC103363216
Malate synthase-like.
  
 
 0.965
mdh2
Malate dehydrogenase.
  
 0.959
LOC103373485
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.951
LOC103375932
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.951
LOC103372869
Malate dehydrogenase.
  
 0.944
mdh1
Malate dehydrogenase.
  
 0.944
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.938
LOC103357262
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.936
ldhb
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.936
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.