STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000008246Rap guanine nucleotide exchange factor (GEF) 5a. (599 aa)    
Predicted Functional Partners:
ENSSPAP00000017331
C2 domain-containing protein.
    
 0.909
ENSSPAP00000017360
PDZ domain-containing protein.
    
 0.909
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.909
mras
Muscle RAS oncogene homolog.
    
 0.904
LOC103373551
RAS related.
    
 0.836
rras2
RAS related 2.
    
 0.836
LOC103354437
RAP1A, member of RAS oncogene family a.
    
 0.775
rap1a
Uncharacterized protein.
    
 0.775
LOC103368175
Uncharacterized protein.
    
 0.775
CSDE1
Cold shock domain containing E1, RNA-binding.
    
 0.727
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.