STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000008375Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
LOC103366615
Motilin_assoc domain-containing protein.
     
 0.827
chrd
Chordin; Belongs to the chordin family.
    
 0.674
LOC103369159
Noggin; Belongs to the noggin family.
    
 0.622
irak1
Interleukin-1 receptor-associated kinase 1.
    
 0.620
NOG
Noggin; Belongs to the noggin family.
    
 0.599
ENSSPAP00000023201
Noggin; Belongs to the noggin family.
    
 0.599
LOC103356052
Growth hormone secretagogue receptor b; Belongs to the G-protein coupled receptor 1 family.
    
 0.561
acvr1
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.555
ACVR1C
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
    
 0.555
bmpr1b
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.555
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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