STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kat2aK(lysine) acetyltransferase 2A. (304 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.997
trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.985
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.985
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.985
tada2a
Transcriptional adaptor 2A.
   
 0.982
LOC103367729
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.980
sgf29
SAGA complex associated factor 29.
    
 0.977
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.974
ep300
E1A binding protein p300 b.
    
 0.968
LOC103371563
E1A binding protein p300 a.
    
 0.968
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.