STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363951RRM domain-containing protein. (214 aa)    
Predicted Functional Partners:
SRSF3
Serine and arginine rich splicing factor 3b.
   
0.975
ENSSPAP00000023710
RRM domain-containing protein.
   
 0.975
srsf9
Serine and arginine rich splicing factor 9.
   
 0.966
LOC103365142
Uncharacterized protein.
  
0.956
LOC103362657
Serine and arginine rich splicing factor 1a.
   
0.953
srsf7
Serine and arginine rich splicing factor 7b.
   
0.934
ENSSPAP00000029545
Serine and arginine rich splicing factor 7a.
   
0.934
nxf1
Zgc:153681.
   
 0.931
ENSSPAP00000029132
RRM domain-containing protein.
  
 0.900
srpk1
SRSF protein kinase 1a.
    
 0.897
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.