STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yme1l1YME1-like 1a. (722 aa)    
Predicted Functional Partners:
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
   0.914
timmdc1
Uncharacterized protein.
   
   0.913
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit b.
  
  
 0.852
stoml2
Stomatin (EPB72)-like 2.
  
 0.846
LOC103361287
PHB domain-containing protein.
  
 0.846
phb
Prohibitin.
  
 0.843
LOC103352978
Prohibitin.
  
 0.810
LOC103357327
Prohibitin.
  
 0.810
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.788
stoml1
Stomatin (EPB72)-like 1.
  
 0.779
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.