STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103371800Galectin. (131 aa)    
Predicted Functional Partners:
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
    
 0.557
ptprc
Protein tyrosine phosphatase receptor type C.
    
 
 0.551
slc38a11
Solute carrier family 38 member 11.
    
 
 0.503
LOC103359954
Galectin.
   
0.501
LOC103353910
Galectin.
   
0.501
LOC103373760
Galectin.
   
 0.501
LOC103356278
Protein S100; Belongs to the S-100 family.
   
 0.464
fam20b
FAM20B glycosaminoglycan xylosylkinase.
    
 0.457
LOC103353010
Epithelial membrane protein 3b.
   
  
 0.427
samd7
Sterile alpha motif domain containing 7.
    
 0.425
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.