STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103370652Endo/exonuclease/phosphatase domain-containing protein. (328 aa)    
Predicted Functional Partners:
ENSSPAP00000005790
Protein kinase domain-containing protein.
   
 0.912
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.912
LOC103374020
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.868
optn
Optineurin.
   
 0.848
tradd
Tnfrsf1a-associated via death domain.
     
 0.846
tbkbp1
TBK1 binding protein 1.
     
 0.845
azi2
5-azacytidine induced 2.
   
 
 0.826
ENSSPAP00000014769
Uncharacterized protein.
     
 0.773
sqstm1
Sequestosome 1.
     
 0.757
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.738
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.