STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc22a16Solute carrier family 22 member 16. (580 aa)    
Predicted Functional Partners:
LOC103363216
Malate synthase-like.
   
 
 0.877
suox
Sulfite oxidase.
     
 0.864
pla2g4a
Phospholipase A2.
    
 0.833
nit2
Nitrilase family, member 2.
   
 
 0.803
LOC103374995
Amine oxidase.
    
  0.661
il4i1
Amine oxidase.
    
  0.661
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.626
ints9
Integrator complex subunit 9.
    
 0.615
ints1
Integrator complex subunit 1.
    
 0.606
ints11
Integrator complex subunit 11.
    
 0.601
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.