STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000009639Uncharacterized protein. (69 aa)    
Predicted Functional Partners:
micu1
Mitochondrial calcium uptake 1.
    
 0.979
micu2
Mitochondrial calcium uptake 2.
    
 0.976
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.904
LOC103358468
Mitochondrial calcium uniporter.
    
 0.904
LOC103365257
MCU domain-containing protein.
    
 0.904
mcu
Mitochondrial calcium uniporter.
    
 0.904
micu3
Mitochondrial calcium uptake family, member 3a.
     
 0.767
LOC103374381
Mitochondrial calcium uptake family, member 3b.
     
 0.767
edf1
Endothelial differentiation-related factor 1.
   
    0.764
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.734
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.