STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shank1SH3 and multiple ankyrin repeat domains 1. (840 aa)    
Predicted Functional Partners:
ENSSPAP00000023042
Si:ch73-335l21.4.
   
 0.930
ENSSPAP00000001214
Uncharacterized protein.
   
 0.893
LOC103375499
Uncharacterized protein.
   
 0.893
ENSSPAP00000022145
FERM_f0 domain-containing protein.
  
 
0.850
LOC103354437
RAP1A, member of RAS oncogene family a.
   
 0.848
rap1a
Uncharacterized protein.
   
 0.848
LOC103368175
Uncharacterized protein.
   
 0.848
LOC103366014
Uncharacterized protein.
   
 0.841
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
   
 0.841
LOC103359253
Discs, large (Drosophila) homolog-associated protein 2b.
   
 0.841
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.