STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM20Translocase of outer mitochondrial membrane 20. (146 aa)    
Predicted Functional Partners:
tomm22
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.984
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 0.979
TOMM7
Translocase of outer mitochondrial membrane 7.
   
 0.966
tomm40
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 0.943
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
   
 0.943
LOC103360127
Translocase of outer mitochondrial membrane 40 homolog, like.
   
 0.943
tomm5
Translocase of outer mitochondrial membrane 5 homolog (yeast).
   
 
 0.870
usp30
Ubiquitin carboxyl-terminal hydrolase.
    
 0.861
tomm6
Translocase of outer mitochondrial membrane 6 homolog (yeast).
     
 0.861
LOC103355718
PVR cell adhesion molecule related 2 like.
   
 0.846
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.