STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cskmtMethyltransf_25 domain-containing protein. (254 aa)    
Predicted Functional Partners:
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.574
etfbkmt
Electron transfer flavoprotein subunit beta lysine methyltransferase.
      
 0.501
mtrf1l
Mitochondrial translational release factor 1-like.
      
 0.501
smarcc2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
    
 0.489
ENSSPAP00000008683
SWIRM-assoc_2 domain-containing protein.
    
 0.489
smarcc1
Uncharacterized protein.
    
 0.489
LOC103371501
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1b.
    
 0.489
rlf
Rearranged L-myc fusion.
      
 0.467
stx10
Syntaxin 10.
   
 
  0.453
stx6
Syntaxin 6; Belongs to the syntaxin family.
   
 
  0.453
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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