STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103363427FRAS1 related extracellular matrix 2b. (3114 aa)    
Predicted Functional Partners:
LOC103372019
Fraser extracellular matrix complex subunit 1.
   
0.916
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.915
frem1
Fras1 related extracellular matrix 1a.
  
0.910
LOC103369110
Fras1 related extracellular matrix 1b.
  
0.904
npnt
Nephronectin a.
    
  0.869
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.851
LOC103365304
Integrin beta; Belongs to the integrin beta chain family.
    
 0.847
ENSSPAP00000030530
Uncharacterized protein.
 
 
 0.842
LOC103366961
Integrin beta.
    
 0.839
ENSSPAP00000021246
Integrin_b_cyt domain-containing protein.
    
 0.839
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.