STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mib2Mindbomb E3 ubiquitin protein ligase 2. (1028 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 0.997
tradd
Tnfrsf1a-associated via death domain.
    
  0.980
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.958
prkn
RBR-type E3 ubiquitin transferase.
    
 0.943
traf7
TNF receptor-associated factor 7.
    
 0.934
zfand4
Zinc finger, AN1-type domain 4.
   
 0.932
LOC103366020
Protein kinase domain-containing protein.
    
 0.927
ENSSPAP00000002820
Uncharacterized protein.
    
 0.927
ENSSPAP00000005790
Protein kinase domain-containing protein.
    
 0.927
LOC103369011
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.927
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.