STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serp2Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (65 aa)    
Predicted Functional Partners:
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 
 0.712
sgta
Small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha.
    
  0.645
sgtb
Small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta.
    
  0.645
ttc33
Tetratricopeptide repeat domain 33.
    
  0.607
ENSSPAP00000003713
SEC61 translocon gamma subunit.
   
 
  0.585
stx5
Syntaxin 5A; Belongs to the syntaxin family.
     
 0.556
ube2j2
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
     
 0.498
c1qtnf12
C1q and TNF related 12.
     
 0.493
get1
Guided entry of tail-anchored proteins factor 1.
     
 0.472
xbp1
X-box binding protein 1.
   
 
 0.428
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.