STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc15a2Solute carrier family 15 member 2. (704 aa)    
Predicted Functional Partners:
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.654
slc39a13
Solute carrier family 39 member 13.
   
 
 0.530
slc33a1
Solute carrier family 33 member 1.
  
 
 0.466
ddx52
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
      
 0.416
edil3
EGF-like repeats and discoidin I-like domains 3a.
  
 
 0.407
LOC103356251
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
  
 
 0.407
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
  
 
 0.407
LOC103365129
Hephaestin-like 1b; Belongs to the multicopper oxidase family.
  
 
 0.407
LOC103374891
Ceruloplasmin; Belongs to the multicopper oxidase family.
  
 
 0.407
LOC103356957
F5/8 type C domain-containing protein.
  
 
 0.407
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.