STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd1aSET domain containing 1A, histone lysine methyltransferase. (2214 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.983
rbbp5
Retinoblastoma binding protein 5.
    
 0.983
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.963
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
0.950
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
   
 0.946
ENSSPAP00000007076
CXXC finger protein 1a.
   
 0.930
LOC103365906
CXXC finger protein 1b.
   
 0.930
wdr82
WD repeat domain 82.
   
 0.925
LOC103357907
Uncharacterized protein.
   
 0.925
UBB
Ubiquitin B.
   
 0.914
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.