STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ofd1OFD1 centriole and centriolar satellite protein. (1066 aa)    
Predicted Functional Partners:
LOC103363216
Malate synthase-like.
   
 
 0.886
pcm1
Pericentriolar material 1.
   
 
 0.788
plk2
Serine/threonine-protein kinase PLK.
   
 0.763
plk3
Serine/threonine-protein kinase PLK.
   
 0.763
PLK1
Serine/threonine-protein kinase PLK.
   
 0.763
fopnl
Fgfr1op N-terminal like.
   
 
 0.717
c2cd3
C2 domain containing 3 centriole elongation regulator.
    
 0.682
ENSSPAP00000029571
Uncharacterized protein.
    
 
 0.682
arl13b
ADP-ribosylation factor-like 13b.
   
 
 0.658
plk4
Polo-like kinase 4 (Drosophila).
   
 0.652
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.