STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL2Fidgetin like 2. (684 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
   
 0.970
ist1
IST1 factor associated with ESCRT-III.
    
 0.882
chmp3
Charged multivesicular body protein 3.
   
 0.854
ufd1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.842
yod1
YOD1 deubiquitinase.
   
 0.792
faap100
Si:dkey-57h18.1.
    
 0.789
nploc4
NPL4 homolog, ubiquitin recognition factor.
    
 0.789
faf2
Fas associated factor family member 2.
   
 0.784
faf1
Fas (TNFRSF6) associated factor 1.
   
 0.784
aspscr1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.772
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.