STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000010441Tyrosine-protein kinase receptor. (669 aa)    
Predicted Functional Partners:
LOC103362802
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 0.933
ENSSPAP00000003300
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.913
ENSSPAP00000010137
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
   
 0.909
grb2
Growth factor receptor-bound protein 2b.
    
 0.889
egf
Epidermal growth factor.
   
 0.872
LOC103358766
Ephrin-A1a; Belongs to the ephrin family.
    
 0.871
efna1
Ephrin-A1b; Belongs to the ephrin family.
    
 0.871
LOC103354058
Ephrin-A2a; Belongs to the ephrin family.
    
 0.870
LOC103359810
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
    
 0.870
hgf
Hepatocyte growth factor; Potent mitogen for mature parenchymal hepatocyte cells, seems to be a hepatotrophic factor, and acts as a growth factor for a broad spectrum of tissues and cell types. Activating ligand for the receptor tyrosine kinase MET by binding to it and promoting its dimerization. Belongs to the peptidase S1 family. Plasminogen subfamily.
    
 0.866
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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