STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slx4ipSLX4 interacting protein. (424 aa)    
Predicted Functional Partners:
ENSSPAP00000003152
BTB domain-containing protein.
    
 
 0.802
nars1
Asparaginyl-tRNA synthetase.
    
 
 0.635
mus81
MUS81 structure-specific endonuclease subunit.
    
 
 0.622
terf2ip
Uncharacterized protein.
    
 
 0.585
ercc1
Excision repair cross-complementation group 1.
    
 
 0.576
esf1
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
      
 0.535
LOC103361641
Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA.
    
 
 0.529
ercc4
Excision repair cross-complementation group 4.
    
 
 0.511
ENSSPAP00000002448
Uncharacterized protein.
      
 0.491
eme1
Essential meiotic structure-specific endonuclease 1.
      
 0.491
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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