STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cux2Homeobox protein cut-like. (1399 aa)    
Predicted Functional Partners:
ENSSPAP00000010670
Uncharacterized protein.
 
  
 
 0.804
orc3
Origin recognition complex, subunit 3.
    
 
 0.691
LOC103362291
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.532
gosr1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.532
stx5
Syntaxin 5A; Belongs to the syntaxin family.
    
 0.509
cog3
Component of oligomeric golgi complex 3.
    
 0.495
mecom
MDS1 and EVI1 complex locus.
    
 
 0.494
pheta1
Si:ch211-193c2.2.
      
 0.493
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
   
  0.480
LOC103353178
Recombination signal binding protein for immunoglobulin kappa J region a.
   
  0.480
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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