STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103368474Sterol carrier protein 2b. (139 aa)    
Predicted Functional Partners:
pex5l
Peroxisomal biogenesis factor 5-like a.
   
 0.999
pex5
Peroxisomal biogenesis factor 5.
   
 0.999
eci2
Enoyl-CoA delta isomerase 2.
  
 0.998
LOC103363216
Malate synthase-like.
  
 
 0.994
rpp14
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.991
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.990
pex2
Peroxisomal biogenesis factor 2.
     
 0.989
pex14
Peroxisomal biogenesis factor 14.
    
 0.988
fam185a
Family with sequence similarity 185 member A.
    
 0.988
pex10
Peroxisomal biogenesis factor 10.
     
 0.987
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.