STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000010895Si:dkeyp-86d6.2. (261 aa)    
Predicted Functional Partners:
cdh23
Cadherin-related 23.
   
 0.955
pcdh15
Protocadherin-related 15a.
 
      0.897
LOC103365004
Uncharacterized protein.
 
      0.895
fjx1
Four-jointed box kinase 1.
   
 0.674
lhfpl4
LHFPL tetraspan subfamily member 4a.
   
 0.661
lhfpl5
LHFPL tetraspan subfamily member 5b.
   
 0.661
LHFPL4
LHFPL tetraspan subfamily member 4.
   
 0.661
ENSSPAP00000014893
LHFPL tetraspan subfamily member 3.
   
 0.661
ENSSPAP00000015970
LHFPL tetraspan subfamily member 5a.
   
 0.661
LOC103355225
Uncharacterized protein.
   
 0.661
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.