STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl18Mitochondrial ribosomal protein L18. (188 aa)    
Predicted Functional Partners:
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.980
mrpl4
Mitochondrial ribosomal protein L4.
   
   0.977
mrpl38
Mitochondrial ribosomal protein L38.
   
 
 0.968
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.967
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
   0.966
mrpl58
Mitochondrial ribosomal protein L58.
   
   0.963
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.962
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.961
mrpl35
Mitochondrial ribosomal protein L35.
   
   0.961
mrpl27
Mitochondrial ribosomal protein L27.
   
   0.959
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.