STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000011538Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
LOC103368048
Helicase ATP-binding domain-containing protein.
    
 0.983
LOC103359841
Helicase C-terminal domain-containing protein.
    
 0.983
ak9
Adenylate kinase 9.
    
 0.863
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
   
 0.838
ifih1
Interferon induced with helicase C domain 1.
    
 0.816
dhx58
DEXH (Asp-Glu-X-His) box polypeptide 58.
    
 0.816
med14
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.811
wdr73
WD repeat domain 73.
    
 0.803
LOC103366349
Retinoblastoma binding protein 4, like.
    
 0.803
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.803
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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