STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000011744Si:ch211-264e16.1. (1104 aa)    
Predicted Functional Partners:
ugdh
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.877
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
   
 
 0.868
uap1l1
UDP-N-acetylglucosamine pyrophosphorylase 1, like 1.
   
 
 0.865
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
    
 0.864
ENSSPAP00000017534
Chitin synthase 1.
  
  
 
0.830
kdm6b
Lysine (K)-specific demethylase 6B, a.
  
 0.799
LOC103363664
Lysine (K)-specific demethylase 6A, like.
  
 0.799
kdm6a
Lysine (K)-specific demethylase 6A.
  
 0.799
LOC103363029
Lysine (K)-specific demethylase 6B, b.
  
 0.799
has2
Hyaluronan synthase 2.
    
0.795
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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