STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bhlha15Basic helix-loop-helix family, member a15. (190 aa)    
Predicted Functional Partners:
bhlhe41
Basic helix-loop-helix family, member e41.
    
 0.566
FADS6
Fatty acid desaturase 6.
      
 0.502
gart
Phosphoribosylglycinamide formyltransferase.
   
  
 0.473
LOC103357352
Uncharacterized protein.
    
 0.466
hes4
Hairy-related 9.
    
 0.466
hes1
Hairy-related 6.
    
 0.466
id4
Inhibitor of DNA binding 4.
    
 
 0.464
BHLHE40
Basic helix-loop-helix family member e40.
    
 0.443
bhlhe40
Basic helix-loop-helix family, member e40.
    
 0.443
HES2-2
Hes family bHLH transcription factor 2, tandem duplicate 1.
    
 0.436
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.