STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103374152Low density lipoprotein receptor-related protein 2b. (4051 aa)    
Predicted Functional Partners:
agrn
Agrin.
    
 0.908
dkk1
Dickkopf WNT signaling pathway inhibitor 1a.
    
 0.829
dhh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
     
 0.823
ENSSPAP00000029941
Growth arrest-specific 1b.
     
 0.823
ENSSPAP00000027058
Uncharacterized protein.
     
 0.822
ENSSPAP00000027952
Growth arrest-specific 1a.
     
 0.822
ptch2
Patched 2.
     
 0.821
ptch1
Patched 1.
     
 0.818
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.810
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
     
 0.799
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.