STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSPAP00000012067Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.770
npc1
Niemann-Pick disease, type C1.
   
 0.770
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.702
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.671
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.649
LOC103375265
SREBF chaperone.
   
 0.571
ENSSPAP00000026899
Uncharacterized protein.
   
 0.571
ENSSPAP00000027029
Ras homolog family member H.
    
  0.555
LOC103370959
Ras homolog family member Q.
    
  0.555
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.539
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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