STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103355706Thymosin beta 2. (56 aa)    
Predicted Functional Partners:
LOC103365100
Uncharacterized protein.
   
 0.648
actb
Uncharacterized protein.
   
 0.648
ENSSPAP00000001224
Actin alpha 2, smooth muscle; Belongs to the actin family.
   
 0.631
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.631
ACTA1-2
Actin alpha 1, skeletal muscle.
   
 0.631
actc1
Zgc:86709.
   
 0.631
LOC103359531
Uncharacterized protein.
   
 0.631
LOC103367064
Actin, alpha cardiac.
   
 0.631
LOC103372992
Actin related protein 1, centractin.
   
 0.624
actl6a
Actin-like 6A; Belongs to the actin family.
    
 0.614
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.