STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103354571DEAF1 transcription factor. (554 aa)    
Predicted Functional Partners:
helz
Helicase with zinc finger.
      
 0.485
zmynd19
Zinc finger, MYND-type containing 19.
      
 0.470
LOC103363026
5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1.
      
 0.465
ENSSPAP00000003172
Uncharacterized protein.
   
  
 0.433
zmynd11
Zinc finger, MYND-type containing 11.
   
  
 0.433
htr2b
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled.
      
 0.426
taldo1
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
      
 0.418
dolk
Dolichol kinase.
      
 0.416
ENSSPAP00000022919
Uncharacterized protein.
      
 0.402
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.