STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam13aFamily with sequence similarity 13 member A. (1137 aa)    
Predicted Functional Partners:
arhgap1
Uncharacterized protein.
    
0.492
LOC103372064
Cell division cycle 42.
    
 0.476
CDC42
Cell division cycle 42.
    
 0.476
rictor
RPTOR independent companion of MTOR, complex 2 a.
   
 
  0.469
LOC103356837
Uncharacterized protein.
    
 0.467
rnd3
Rho family GTPase 3a.
    
 0.455
LOC103358261
Rho family GTPase 1b.
    
 0.455
LOC103356055
Ras homolog family member Ca.
    
 0.455
LOC103362809
Uncharacterized protein.
    
 0.455
LOC103374076
Uncharacterized protein.
    
 0.455
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.