STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agrnAgrin. (2085 aa)    
Predicted Functional Partners:
LOC103354448
Peptidase S72 domain-containing protein.
   
 0.961
LOC103371033
Dystroglycan 1.
   
 0.961
ENSSPAP00000026831
Uncharacterized protein.
    
 0.936
lrp4
Low density lipoprotein receptor-related protein 4.
    
 0.936
LOC103373135
Peptidase S72 domain-containing protein.
   
 0.924
ENSSPAP00000001517
EGF-like domain-containing protein.
    
 0.908
LOC103361077
Uncharacterized protein.
    
 0.908
lrp2
Low density lipoprotein receptor-related protein 2a.
    
 0.908
LOC103374152
Low density lipoprotein receptor-related protein 2b.
    
 0.908
ENSSPAP00000005369
Uncharacterized protein.
    
 0.801
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.