STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103353521ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (662 aa)    
Predicted Functional Partners:
trpm2
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.884
trpm7
Transient receptor potential cation channel, subfamily M, member 7.
   
 
 0.733
trpm6
Transient receptor potential cation channel, subfamily M, member 6.
   
 
 0.733
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
     
 0.670
LOC103372325
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 
 0.624
calm1
Calmodulin 1.
    
 
 0.624
LOC103353515
Calmodulin.
    
 
 0.624
LOC103370449
Calmodulin.
    
 
 0.624
ENSSPAP00000013116
Transient receptor potential cation channel, subfamily M, member 5.
   
 
 0.586
ENSSPAP00000013140
LSDAT_euk domain-containing protein.
   
 
 0.586
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.