Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSSPAP00000018980 | gmnc | ENSSPAP00000018980 | ENSSPAP00000012459 | HTH La-type RNA-binding domain-containing protein. | Geminin coiled-coil domain containing. | 0.485 |
LOC103354325 | gmnc | ENSSPAP00000027192 | ENSSPAP00000012459 | La ribonucleoprotein domain family, member 6a. | Geminin coiled-coil domain containing. | 0.528 |
PSPN | gmnc | ENSSPAP00000009363 | ENSSPAP00000012459 | Persephin. | Geminin coiled-coil domain containing. | 0.408 |
gmnc | ENSSPAP00000018980 | ENSSPAP00000012459 | ENSSPAP00000018980 | Geminin coiled-coil domain containing. | HTH La-type RNA-binding domain-containing protein. | 0.485 |
gmnc | LOC103354325 | ENSSPAP00000012459 | ENSSPAP00000027192 | Geminin coiled-coil domain containing. | La ribonucleoprotein domain family, member 6a. | 0.528 |
gmnc | PSPN | ENSSPAP00000012459 | ENSSPAP00000009363 | Geminin coiled-coil domain containing. | Persephin. | 0.408 |
gmnc | iws1 | ENSSPAP00000012459 | ENSSPAP00000012406 | Geminin coiled-coil domain containing. | TFIIS N-terminal domain-containing protein. | 0.442 |
gmnc | rfx4 | ENSSPAP00000012459 | ENSSPAP00000011707 | Geminin coiled-coil domain containing. | Regulatory factor X, 4. | 0.493 |
gmnc | topbp1 | ENSSPAP00000012459 | ENSSPAP00000011447 | Geminin coiled-coil domain containing. | DNA topoisomerase II binding protein 1. | 0.491 |
iws1 | gmnc | ENSSPAP00000012406 | ENSSPAP00000012459 | TFIIS N-terminal domain-containing protein. | Geminin coiled-coil domain containing. | 0.442 |
rfx4 | gmnc | ENSSPAP00000011707 | ENSSPAP00000012459 | Regulatory factor X, 4. | Geminin coiled-coil domain containing. | 0.493 |
topbp1 | gmnc | ENSSPAP00000011447 | ENSSPAP00000012459 | DNA topoisomerase II binding protein 1. | Geminin coiled-coil domain containing. | 0.491 |