STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
per3Period circadian clock 3. (1276 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
   
 0.967
LOC103363998
Cryptochrome circadian regulator 1b.
   
 0.914
LOC103369113
Cryptochrome DASH.
   
 0.914
bhlhe41
Basic helix-loop-helix family, member e41.
    
 0.851
LOC103368406
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
 0.833
CSNK1D
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 0.833
csnk1d
Casein kinase 1 delta; Belongs to the protein kinase superfamily.
    
 0.833
csnk1e
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.833
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.831
ENSSPAP00000022288
Uncharacterized protein.
    
 0.831
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.