STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sort1Sortilin. (799 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
     
 0.980
ENSSPAP00000017677
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.955
nts
Neurotensin.
    
 
 0.942
LOC103367916
Sortilin.
  
  
 
0.899
LOC103364863
Proteasome subunit alpha type.
    
   0.855
psmb1
Proteasome subunit beta.
    
   0.855
psma1
Proteasome subunit alpha type.
    
   0.855
LOC103358559
Nerve growth factor receptor b.
    
 0.838
ENSSPAP00000015801
Sortilin.
  
  
 
0.835
ENSSPAP00000010137
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
    
 
 0.790
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.