STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcf2lMcf.2 cell line derived transforming sequence-like a. (1122 aa)    
Predicted Functional Partners:
LOC103372064
Cell division cycle 42.
    
 0.741
CDC42
Cell division cycle 42.
    
 0.741
LOC103356837
Uncharacterized protein.
    
 0.714
LOC103356055
Ras homolog family member Ca.
    
 0.629
LOC103362809
Uncharacterized protein.
    
 0.629
LOC103374076
Uncharacterized protein.
    
 0.629
LOC103357909
Uncharacterized protein.
    
 0.629
LOC103360972
Uncharacterized protein.
    
 0.629
LOC103367639
Uncharacterized protein.
    
 0.629
RHOB
Ras homolog family member B.
    
 0.629
Your Current Organism:
Stegastes partitus
NCBI taxonomy Id: 144197
Other names: S. partitus, bicolor damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.